Online Shopify Bookkeeping
Services for Canadian Stores
Reconcile payouts. Understand profit. Grow confidently!
From Shopify orders to reliable monthly reports. Get ecommerce bookkeeping that’s organized, accurate, and fully online – without the big-firm price tag. We reconcile Shopify payouts, processing fees, refunds and bank deposits in QuickBooks or Xero so you can focus on growing your store.
Helping growing Shopify businesses across Canada keep their sales, expenses, inventory and GST/HST bookkeeping organized.
Over 7+ years of bookkeeping experience
Supporting Canadian Small Businesses
Why Accurate Shopify Bookkeeping Matters to Us.
Shopify reports, accounting software and bank deposits often show different totals. Processing fees, refunds, chargebacks, taxes and payout timing all affect the numbers. Our specialized Shopify Bookkeeping service helps you understand those differences and maintain dependable records.
With reconciled Shopify sales and reliable monthly financial statements, you can monitor margins, prepare GST/HST records and make better decisions about inventory, advertising and cash flow.
Our goal is simple:
To turn complex Shopify transactions into accurate, understandable books that support your next stage of growth.
WHAT YOU GET
Shopify Sales & Payout Reconciliation
We reconcile Shopify orders, Shopify Payments payouts, refunds, chargebacks, payment fees and bank deposits. We investigate differences so revenue is not confused with cash received.
QuickBooks & Xero Setup
We organize Shopify bookkeeping in QuickBooks Online or Xero, review your existing setup and help establish workflows that avoid duplicate sales and misclassified payouts.
Shopify Profit & Loss Reporting
Receive monthly Profit & Loss and Balance Sheet reports with clear treatment of processing fees, refunds, shipping costs and inventory-related expenses.
Ongoing Ecommerce Bookkeeping
We maintain bank reconciliations, review sales and payment activity, and establish practical routines for accurate month-end reporting as your Shopify order volume grows.
Our Service Details
Monthly Shopify Financial Reports
Review monthly Profit & Loss and Balance Sheet reports so you can track revenue, fees, expenses and overall store performance.
Shopify Bookkeeping & Cleanup
Behind on Shopify bookkeeping? We can investigate historical payout differences, correct errors and maintain your books going forward.
Shopify Payout & Bank Reconciliations
We match Shopify settlements and payment processor activity to bank deposits, accounting for fees, refunds and timing differences.
Canadian Shopify GST/HST Review
We reconcile sales-tax-related records, including taxes collected, refunds and adjustments, to support accurate GST/HST reporting.
Inventory & Cost of Goods Sold
We help organize inventory purchases, cost of goods sold and related adjustments so your financial reports better reflect product profitability.
Supplier Bills & Operating Expenses
We record supplier bills, advertising costs, shipping expenses and other operating transactions to keep your ecommerce expenses organized.
Shopify Accounting Workflow Setup
We review Shopify-to-accounting workflows, bank feeds and receipt capture to reduce repetitive work while preserving reconciliation checks.
QuickBooks / Xero Troubleshooting
We investigate duplicate Shopify sales, incorrect clearing accounts, unreconciled deposits and other accounting setup issues.
Why Us?
So you understand the numbers behind your Shopify store
A Bookkeeper Who Understands Ecommerce
Work with a consistent point of contact who understands Shopify payouts, refunds, fees and your accounting history.
Cloud-Based Shopify Accounting
We work with QuickBooks Online, Xero and cloud workflows to keep your Shopify bookkeeping accessible and organized.
Built for Your Store’s Volume
From emerging stores to established brands, we tailor bookkeeping scope to transaction volume, payment methods and reporting complexity.
Experienced with Cloud Accounting Software
Client Testimonials
★★★★★
The perfect Accountant! He help me out with all my questions. I will recommend it and work again with him! Thank you so much Samuel. You are the best
Lucia
★★★★★
I needed someone to automate my shopify with Quickbooks. Samuel was able to do this and now I only spend 1 hour per month on bookkeeping. A lot better than the hours I spent trying to figure it all out.
Megan
★★★★★
Paperless Books helped me fix my quickbooks. It was a mess. Quickbooks is too complicated for me so I am grateful they were able to bring it up to date for me.
Kwame
Shopify Bookkeeping Service Prices
Choose a monthly bookkeeping plan for your Shopify business. Final scope depends on transaction volume, payment processors and complexity.
Monthly Plans
Lite
<$200K yearly gross revenue
- Monthly bank and Shopify payout reconciliations
- Unlimited email/phone support
- Monthly Financial Reports
- Categorizing Shopify fees and bank transactions
- Shopify bookkeeping in QuickBooks or Xero
- GST/HST bookkeeping support and filing preparation
- Historical Shopify bookkeeping cleanup ($50 / hour)
Plus
$200K – $500K yearly gross revenue
- Monthly bank and Shopify payout reconciliations
- Unlimited email/phone support
- Monthly Financial Reports
- Supplier bill and expense tracking
- Shopify sales and refund tracking
- Shopify bookkeeping in QuickBooks or Xero
- GST/HST bookkeeping support and filing preparation
- Online receipt management in receipt management software – as neeeded
- Historical Shopify bookkeeping cleanup ($50 / hour)
Premium
$500K + yearly gross revenue
- Monthly bank and Shopify payout reconciliations
- Unlimited email/phone support
- Monthly Financial Reports
- Supplier bill and expense tracking
- Shopify sales and refund tracking
- Shopify bookkeeping in QuickBooks or Xero
- GST/HST bookkeeping support and filing preparation
- Payroll management with Wagepoint (1–5 employees)
- Online receipt management in receipt management software
- Historical Shopify bookkeeping cleanup ($50 / hour)
Shopify Businesses We Can Support:
Apparel and fashion stores • Beauty and skincare brands • Home goods shops • Subscription businesses • Digital product stores • Dropshipping businesses • Canadian direct-to-consumer brands • Cross-border Shopify sellers
Remote Shopify Bookkeeping Service Across Canada:
Based in Hamilton, Ontario, and serving Shopify businesses remotely across Ontario and Canada.
Frequently Asked Questions
How do Shopify sales differ from Shopify payouts?
How do Shopify sales differ from Shopify payouts?
Shopify sales are not the same as bank deposits. Payment fees, refunds, chargebacks, taxes and settlement timing can create differences. We reconcile the underlying activity rather than treating each payout as revenue.
Do you use QuickBooks Online or Xero for Shopify?
Do you use QuickBooks Online or Xero for Shopify?
Yes. We support Shopify bookkeeping in QuickBooks Online and Xero and can review existing integrations and transaction workflows
What types of Shopify stores do you support?
What types of Shopify stores do you support?
We work with Canadian Shopify businesses, including direct-to-consumer brands, product-based stores and cross-border sellers. The scope depends on your transactions and accounting needs.
How often should Shopify bookkeeping be updated?
How often should Shopify bookkeeping be updated?
Most Shopify businesses benefit from monthly reconciliations and reporting. Higher-volume stores may need more frequent review of payout and sales activity.
Can you help with Shopify inventory and cost of goods sold?
Can you help with Shopify inventory and cost of goods sold?
We can help organize inventory-related bookkeeping and cost-of-goods-sold entries based on the inventory records and systems your store maintains.
How does GST/HST work for Canadian Shopify sales?
How does GST/HST work for Canadian Shopify sales?
GST/HST treatment depends on the customer location, the product and your registration obligations. We help reconcile the tax-related bookkeeping records and flag questions for tax review.
Can you help if my Shopify books are months behind?
Yes. We can review past Shopify reports, payment processor settlements and bank statements to identify discrepancies and bring bookkeeping records up to date.
Can you handle multiple currencies and international sales?
Can you handle multiple currencies and international sales?
We can review multicurrency bookkeeping needs, including foreign-currency payouts and exchange differences. The appropriate workflow depends on your platforms and payment providers.
Is my Shopify and financial information handled securely?
Is my Shopify and financial information handled securely?
We use cloud accounting workflows and appropriate access permissions. We can discuss your access and data-handling requirements during onboarding.
Shopify Bookkeeping Guides
- 10 Shopify Bookkeeping Mistakes That’s Costing You
- Shopify and QuickBooks Reports to Review Before Filing GST/HST
- 6 Reasons Shopify Sales Don’t Match Quickbooks Sales
- How to Outsource an Accounting Department for Shopify Businesses in Canada
- Can AI Fully Automate Bookkeeping for a Shopify Business in 2027?
- Shopify Gift Cards: How to Account for them in Quickbooks or Xero
